Samala RK, Drukker K, Shukla-Dave A, Chan HP, Sahiner B, Petrick N, Greenspan H, Mahmood U, Summers RM, Tourassi G, Deserno TM, Regge D, Näppi JJ, Yoshida H, Huo Z, Chen Q, Vergara D, Cha KH, Mazurchuk R, Grizzard KT, Huisman H, Morra L, Suzuki K, Armato SG 3rd, Hadjiiski L. AI and machine learning in medical imaging: key points from development to translation.BJR Artif Intell. 2024 Apr 29;1(1):ubae006.

Mahmood U, Shukla-Dave A, Chan HP, Drukker K, Samala RK, Chen Q, Vergara D, Greenspan H, Petrick N, Sahiner B, Huo Z, Summers RM, Cha KH, Tourassi G, Deserno TM, Grizzard KT, Näppi JJ, Yoshida H, Regge D, Mazurchuk R, Suzuki K, Morra L, Huisman H, Armato SG 3rd, Hadjiiski L. Artificial intelligence in medicine: mitigating risks and maximizing benefits via quality assurance, quality control, and acceptance testing.BJR Artif Intell. 2024 Mar 4;1(1):ubae003.

Paudyal R, Jiang J, Han J, Diplas BH, Riaz N, Hatzoglou V, Lee N, Deasy JO, Veeraraghavan H, Shukla-Dave A. Auto-segmentation of neck nodal metastases using self-distilled masked image transformer on longitudinal MR images. BJR Artif Intell. 2024 Mar 4;1(1):ubae004.

Lee NY, Sherman EJ, Schöder H, Wray R, Boyle JO, Singh B, Grkovski M, Paudyal R, Cunningham L, Zhang Z, Hatzoglou V, Katabi N, Diplas BH, Han J, Imber BS, Pham K, Yu Y, Zakeri K, McBride SM, Kang JJ, Tsai CJ, Chen LC, Gelblum DY, Shah JP, Ganly I, Cohen MA, Cracchiolo JR, Morris LGT, Dunn LA, Michel LS, Fetten JV, Kripani A, Pfister DG, Ho AL, Shukla-Dave A, Humm JL, Powell SN, Li BT, Reis-Filho JS, Diaz LA, Wong RJ, Riaz N. Hypoxia-Directed Treatment of Human Papillomavirus-Related Oropharyngeal Carcinoma. J Clin Oncol. 2024 Jan 19: JCO2301308. doi: 10.1200/JCO.23.01308. Online ahead of print.

Shalom ES, Kim H, van der Heijden RA, Ahmed Z, Patel R, Hormuth DA 2nd, DiCarlo JC, Yankeelov TE, Sisco NJ, Dortch RD, Stokes AM, Inglese M, Grech-Sollars M, Toschi N, Sahoo P, Singh A, Verma SK, Rathore DK, Kazerouni AS, Partridge SC, LoCastro E, Paudyal R, Wolansky IA, Shukla-Dave A, Schouten P, Gurney-Champion OJ, Jiřík R, Macíček O, Bartoš M, Vitouš J, Das AB, Kim SG, Bokacheva L, Mikheev A, Rusinek H, Berks M, Hubbard Cristinacce PL, Little RA, Cheung S, O’Connor JPB, Parker GJM, Moloney B, LaViolette PS, Bobholz S, Duenweg S, Virostko J, Laue HO, Sung K, Nabavizadeh A, Saligheh Rad H, Hu LS, Sourbron S, Bell LC, Fathi Kazerooni AThe ISMRM Open Science Initiative for Perfusion Imaging (OSIPI): Results from the OSIPI-Dynamic Contrast-Enhanced challenge. Magn Reson Med. 2023 Dec 19. doi: 10.1002/mrm.29909. Online ahead of print.

Vergara D, Armato SG 3rd, Hadjiiski L, Drukker K; CADSC (TG 273 including Shukla-Dave A). Best Practices for Artificial Intelligence and Machine Learning for Computer-Aided Diagnosis in Medical Imaging. J Am Coll Radiol. 2023 Nov 2:S1546-1440(23)00853-0. doi: 10.1016/j.jacr.2023.10.021. Online ahead of print.

LoCastro E, Paudyal R, Konar AS, LaViolette PS, Akin O, Hatzoglou V, Goh AC, Bochner BH, Rosenberg J, Wong RJ, Lee NY, Schwartz LH, Shukla-Dave A A Quantitative Multiparametric MRI Analysis Platform for Estimation of Robust Imaging Biomarkers in Clinical Oncology. Tomography. 2023 Nov 3;9(6):2052-2066. doi: 10.3390/tomography9060161. PMID: 379873 Journal Cover 

Akin O, Lema-Dopico A, Paudyal R, Konar AS, Chenevert TL, Malyarenko D, Hadjiiski L, Al-Ahmadie H, Goh AC, Bochner B, Rosenberg J, Schwartz LH, Shukla-Dave A Multiparametric MRI in Era of Artificial Intelligence for Bladder Cancer Therapies. Cancers (Basel). 2023 Nov 18;15(22):5468. doi: 10.3390/cancers15225468.

McDonald BA, Salzillo T, Mulder S, Ahmed S, Dresner A, Preston K, He R, Christodouleas J, Mohamed ASR, Philippens M, van Houdt P, Thorwarth D, Wang J, Shukla Dave A, Boss M, Fuller CD. Prospective evaluation of in vivo and phantom repeatability and reproducibility of diffusion-weighted MRI sequences on 1.5 T MRI-linear accelerator (MR-Linac) and MR simulator devices for head and neck cancers. Radiother Oncol. 2023 Aug;185:109717. doi: 10.1016/j.radonc.2023.109717. Epub 2023 May 19.

Paudyal R, Shah AD, Akin O, Do RKG, Konar AS, Hatzoglou V, Mahmood U, Lee N, Wong RJ, Banerjee S, Shin J, Veeraraghavan H, Shukla-Dave A. Artificial Intelligence in CT and MR Imaging for Oncological Applications. Cancers (Basel). 2023 Apr 30;15(9):2573. doi: 10.3390/cancers15092573.

Jansen JF, Paudyal R, Mazaheri Y, Shukla-Dave A. Editorial: Bridging quantitative imaging and artificial intelligence methods in preclinical and clinical oncology. Front Oncol. 2023 Sep 1;13: 1272030

Rogers HJ, Singh S, Barnes A, Obuchowski NA, Margolis DJ, Malyarenko DI, Chenevert TL, Shukla-Dave A, Boss MA, Punwani S.Test-retest repeatability of ADC in prostate using the multi b-Value VERDICT acquisition. Eur J Radiol. 2023 May;162:110782. doi: 10.1016/j.ejrad.2023.110782. Epub 2023 Mar 16.

Reyngold M, Karam SD, Hajj C, Wu AJ, Cuaron J, Lobaugh S, Yorke ED, Dickinson S, Jones B, Vinogradskiy Y, Shukla-Dave A, Do RKG, Sigel C, Zhang Z, Crane CH, Goodman KA.Phase 1 Dose Escalation Study of SBRT Using 3 Fractions for Locally Advanced Pancreatic Cancer. Int J Radiat Oncol Biol Phys. 2023 Sep 1;117(1):53-63. doi: 10.1016/j.ijrobp.2023.03.036. Epub 2023 Mar 12.

Solomon E, Lemberskiy G, Baete S, Hu K, Malyarenko D, Swanson S, Shukla-Dave A, Russek SE, Zan E, Kim SG Time-dependent diffusivity and kurtosis in phantoms and patients with head and neck cancer. Magn Reson Med. 2023 Feb;89(2):522-535 

Romeo V, Stanzione A, Ugga L, Cuocolo R, Cocozza S, Quarantelli M, Chawla S, Farina D, Golay X, Parker G, Shukla-Dave A, Thoeny H, Vidiri A, Brunetti A, Surlan-Popovic K, Bisdas S.Clinical indications and acquisition protocol for the use of dynamic contrast-enhanced MRI in head and neck cancer squamous cell carcinoma: recommendations from an expert panel. Insights Imaging. 2022 Dec 17;13(1):198.

Konar AS, Shah AD, Paudyal R, Fung M, Banerjee S, Dave A, Hatzoglou V, Shukla-Dave A. Quantitative Relaxometry Metrics for Brain Metastases Compared to Normal Tissues: A Pilot MR Fingerprinting Study. Cancers (Basel). 2022 Nov 15;14(22):5606

Konar AS, Paudyal R, Shah AD, Fung M, Banerjee S, Dave A, Lee N, Hatzoglou V, Shukla-Dave A. Qualitative and Quantitative Performance of Magnetic Resonance Image Compilation (MAGiC) Method: An Exploratory Analysis for Head and Neck Imaging. Cancers (Basel). 2022 Jul 26;14(15):3624. doi: 10.3390/cancers14153624.

Konar AS, Shah AD, Paudyal R, Fung M, Banerjee S, Dave A, Hatzoglou V, Shukla-Dave A. Quantitative Synthetic Magnetic Resonance Imaging for Brain Metastases: A Feasibility Study.  Cancers (Basel). 2022 May 27;14(11):2651. doi: 10.3390/cancers14112651.

McGarry SD, Brehler M, Bukowy JD, Lowman AK, Bobholz SA, Duenweg SR, Banerjee A, Hurrell SL, Malyarenko D, Chenevert TL, Cao Y, Li Y, You D, Fedorov A, Bell LC, Quarles CC, Prah MA, Schmainda KM, Taouli B, LoCastro E, Mazaheri Y, Shukla-Dave A, Yankeelov TE, Hormuth DA 2nd, Madhuranthakam AJ, Hulsey K, Li K, Huang W, Huang W, Muzi M, Jacobs MA, Solaiyappan M, Hectors S, Antic T, Paner GP, Palangmonthip W, Jacobsohn K, Hohenwalter M, Duvnjak P, Griffin M, See W, Nevalainen MT, Iczkowski KA, LaViolette PS. Multi-Site Concordance of Diffusion-Weighted Imaging Quantification for Assessing Prostate Cancer Aggressiveness. J Magn Reson Imaging. 2022 Jun;55(6):1745-1758. doi: 10.1002/jmri.27983.

Paudyal R, LoCastro E, Reyngold M, Do RK, Konar AS, Oh JH, Dave A, Yu K, Goodman KA, Shukla-Dave A. Longitudinal Monitoring of Simulated Interstitial Fluid Pressure for Pancreatic Ductal Adenocarcinoma Patients Treated with Stereotactic Body Radiotherapy. Cancers (Basel). 2021 Aug 26;13(17):4319. doi: 10.3390/cancers13174319.

Paudyal R, Grkovski M, Oh JH, Schöder H, Nunez DA, Hatzoglou V, Deasy JO, Humm JL, Lee NY, Shukla-Dave A. Application of Community Detection Algorithm to Investigate the Correlation between Imaging Biomarkers of Tumor Metabolism, Hypoxia, Cellularity, and Perfusion for Precision Radiotherapy in Head and Neck Squamous Cell Carcinomas. Cancers (Basel). 2021 Aug 3;13(15):3908. doi: 10.3390/cancers13153908.

Mahmood U, Apte A, Kanan C, Bates DDB, Corrias G, Manneli L, Oh JH, Erdi YE, Nguyen J, O’Deasy J, Shukla-Dave A. Quality control of radiomic features using 3D-printed CT phantoms. J Med Imaging (Bellingham). 2021 May;8(3):033505. doi: 10.1117/1.JMI.8.3.033505. Epub 2021 Jun 29.

Keenan KE, Gimbutas Z, Dienstfrey A, Stupic KF, Boss MA, Russek SE, Chenevert TL, Prasad PV, Guo J, Reddick WE, Cecil KM, Shukla-Dave A, Aramburu Nunez D, Shridhar Konar A, Liu MZ, Jambawalikar SR, Schwartz LH, Zheng J, Hu P, Jackson EF. Multi-site, multi-platform comparison of MRI T1 measurement using the system phantom. PLoS One. 2021 Jun 30;16(6):e0252966. doi: 10.1371/journal.pone.0252966. eCollection 2021.

van Houdt PJ, Saeed H, Thorwarth D, Fuller CD, Hall WA, McDonald BA, Shukla-Dave A, Kooreman ES, Philippens MEP, van Lier ALHMW, Keesman R, Mahmood F, Coolens C, Stanescu T, Wang J, Tyagi N, Wetscherek A, van der Heide UA. Integration of quantitative imaging biomarkers in clinical trials for MR-guided radiotherapy: Conceptual guidance for multicentre studies from the MR-Linac Consortium Imaging Biomarker Working Group. Eur J Cancer. 2021 Aug;153:64-71. doi: 10.1016/j.ejca.2021.04.041. Epub 2021 Jun 15.

Wibmer AG, Kattan MW, Alessandrino F, Baur ADJ, Boesen L, Franco FB, Bonekamp D, Campa R, Cash H, Catalá V, Crouzet S, Dinnoo S, Eastham J, Fennessy FM, Ghabili K, Hohenfellner M, Levi AW, Ji X, Løgager V, Margolis DJ, Moldovan PC, Panebianco V, Penzkofer T, Puech P, Radtke JP, Rouvière O, Schlemmer HP, Sprenkle PC, Tempany CM, Vilanova JC, Weinreb J, Hricak H, Shukla-Dave A. International Multi-Site Initiative to Develop an MRI-Inclusive Nomogram for Side-Specific Prediction of Extraprostatic Extension of Prostate Cancer. Cancers (Basel). 2021 May 27;13(11):2627. doi: 10.3390/cancers13112627.

Oh JH, Apte AP, Katsoulakis E, Riaz N, Hatzoglou V, Yu Y, Mahmood U, Veeraraghavan H, Pouryahya M, Iyer A, Shukla-Dave A, Tannenbaum A, Lee NY, Deasy JO. Reproducibility of radiomic features using network analysis and its application in Wasserstein k-means clustering. J Med Imaging (Bellingham). 2021 May;8(3):031904. doi: 10.1117/1.JMI.8.3.031904. Epub 2021 Apr 30.

Paudyal R, Chen L, Oh JH, Zakeri K, Hatzoglou V, Tsai CJ, Lee N, Shukla-Dave A. Nongaussian Intravoxel Incoherent Motion Diffusion Weighted and Fast Exchange Regime Dynamic Contrast-Enhanced-MRI of Nasopharyngeal Carcinoma: Preliminary Study for Predicting Locoregional Failure. Cancers (Basel). 2021 Mar 6;13(5):1128. doi: 10.3390/cancers13051128.

Shridhar Konar A, Qian E, Geethanath S, Buonincontri G, Obuchowski NA, Fung M, Gomez P, Schulte R, Cencini M, Tosetti M, Schwartz LH, Shukla-Dave A. Quantitative imaging metrics derived from magnetic resonance fingerprinting using ISMRM/NIST MRI system phantom: An international multicenter repeatability and reproducibility study. Med Phys. 2021 May;48(5):2438-2447. doi: 10.1002/mp.14833. Epub 2021 Apr 1.

Riaz N, Sherman E, Pei X, Schöder H, Grkovski M, Paudyal R, Katabi N, Selenica P, Yamaguchi TN, Ma D, Lee SK, Shah R, Kumar R, Kuo F, Ratnakumar A, Aleynick N, Brown D, Zhang Z, Hatzoglou V, Liu LY, Salcedo A, Tsai CJ, McBride S, Morris LGT, Boyle J, Singh B, Higginson DS, Damerla RR, Paula ADC, Price K, Moore EJ, Garcia JJ, Foote R, Ho A, Wong RJ, Chan TA, Powell SN, Boutros PC, Humm JL, Shukla-Dave A, Pfister D, Reis-Filho JS, Lee N. Precision Radiotherapy: Reduction in Radiation for Oropharyngeal Cancer in the 30 ROC Trial. J Natl Cancer Inst. 2021 Jan 12:djaa184. doi: 10.1093/jnci/djaa184. Online ahead of print.

Kooreman ES, van Houdt PJ, Keesman R, Pos FJ, van Pelt VWJ, Nowee ME, Wetscherek A, Tijssen RHN, Philippens MEP, Thorwarth D, Wang J, Shukla-Dave A, Hall WA, Paulson ES, van der Heide UA. ADC measurements on the Unity MR-linac - A recommendation on behalf of the Elekta Unity MR-linac consortium. Radiother Oncol. 2020 Dec;153:106-113. doi: 10.1016/j.radonc.2020.09.046. Epub 2020 Oct 2.